Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015835870.1_cds_XP_016506088.1_19353
CDS Infomation

[gene=LOC107823893] [db_xref=GeneID:107823893] [protein=laccase-12-like] [protein_id=XP_016506088.1] [location=join(41154..41276,41380..41531,41639..41883,41976..42104,42183..43139,43223..43353)] [gbkey=CDS]
Sequence

ATGCAGGCCTTCAACATGAGCATTGCCAACCCCTTGCGCTCTTTGTTAATATATGGCATT
TTGCTTCTTTTTGCAAATGCTGTGTCTTTAGCTAAAGCAAAAATCCACAACCACGACTTT
GTTATTCAAGCAACGCCAGTAAAGAGGCTGTGCAATACGCGCAGCACCATAACAGTGAAT
GGACAATTTCCCGGACCAACTTTGGAAGTGAACAATGGAGATACTCTAGTTGTCAAAGTT
GTCAATAAAGCTCAGTATAATGTCACCATTCATTGGCATGGGGTGAGACAAATGAGAACA
GCATGGGCAGATGGACCAGAATTTATCACACAATGTCCAATAAGACCAGGAGGGAGTTAC
ACTTATCGGTTTACAATTCAAGGACAAGAAGGCACACTTTGGTGGCACGCCCACAGCTCA
TGGCTCAGGGCCACTGTTTATGGAGCCTTAGTTATTCACCCTAAAGAAGGAACTTCCTAC
CCATTCCCTAAGCCCAAGAGAGAAACCCCCATTCTTCTTGGTGAGTGGTGGGATGCAAAC
CCCATTGACGTTATTCGACAAGCCACGCGAACAGGAGCAGCGCCTAATGTATCTGATGCT
TACACTATTAATGGCCAACCCGGTGATCTTTACAAGTGTTCTAGTCAAGATACTACCATA
GTCCATGTGGACTCTGGTGAGACGAACCTCCTTCGAGTCATCAACGCTGGACTCAACCAA
CAACTTTTCTTCAAAGTAGCCAACCACAAGTTCACTGTTGTTGGAGCAGATGCATCTTAT
GTTAAACCTTTCACCACATCAGTCATTATGCTAGGACCAGGCCAAACTACTGATGTCCTC
ATCACTGCAAACCAACCACCAGCCCGGTATTACATGGCTGTGCGCGCCTATGCAAGTGCT
CAAGGTGCACCCTTTGACAATACCACCACTACAGCCATACTAGAATACAAAGCTGCTCCT
TGCCCTGCCAAAGGTGTCAAAATCAATCCCATTCTCCCACCTCTGCCCGCATTTAACGAC
ACTGCTACTGCCACTACCTTCACATCCAGTTTCAGGAGCGCAAGAAAAGTCGATGTCCCA
ACTGAAATCGACGAAAATCTGTTCTTCACAGTTGGATTAGGACTCAATAACTGTCCTGCA
GGGGCAAGCTCCAGCAGCTGTCAAGGTCCAAATGGAACGCGATTCACTGCTAGTATGAAC
AACGTGTCATTTGTGCTACCATCCAATTTCTCCCTGCTTCAAGCACATCACCAGGGGATA
CCTGGAGTTTTCTCAACTGATTTTCCAGCAGTTCCACCAGTTAAATTCGATTACACAGGG
AACGTGAGCAGGTCACTCTGGCAACCTATTTCATCAACTAAACTATACAAGTTAAAATAT
GGTGCGAGAGTGCAAATTGTGTTACAGGGAACTAGTATATTCACAGCTGAAAATCACCCA
ATTCATCTTCATGGTTATGATTTTTACATTCTTGCTGAGGGCTTTGGGAATTTCAATCCA
CAAACTGATACTGCTAAATTCAACCTTGTCGATCCACCTCTTCGTAATACTGCAAGTGTA
CCAGTTAATGGATGGTCTGTTATTAGATTCGTCGCTGATAATCCAGGAGTTTGGATAATG
CATTGTCACTTGGATGTGCATATTACTTGGGGTTTGGCCATGGCTTTCCTCGTCCAAAAT
GGAGTTACTCAATTGGAAGCATTGGAGGAGCCTCCAGTTGATCTTCCTGTCTGTTAA

Peptide Sequence

PEP ID

XP_016506088.1
PEP Infomation

PREDICTED: laccase-12-like [Nicotiana tabacum]
Sequence

MQAFNMSIANPLRSLLIYGILLLFANAVSLAKAKIHNHDFVIQATPVKRLCNTRSTITVN
GQFPGPTLEVNNGDTLVVKVVNKAQYNVTIHWHGVRQMRTAWADGPEFITQCPIRPGGSY
TYRFTIQGQEGTLWWHAHSSWLRATVYGALVIHPKEGTSYPFPKPKRETPILLGEWWDAN
PIDVIRQATRTGAAPNVSDAYTINGQPGDLYKCSSQDTTIVHVDSGETNLLRVINAGLNQ
QLFFKVANHKFTVVGADASYVKPFTTSVIMLGPGQTTDVLITANQPPARYYMAVRAYASA
QGAPFDNTTTTAILEYKAAPCPAKGVKINPILPPLPAFNDTATATTFTSSFRSARKVDVP
TEIDENLFFTVGLGLNNCPAGASSSSCQGPNGTRFTASMNNVSFVLPSNFSLLQAHHQGI
PGVFSTDFPAVPPVKFDYTGNVSRSLWQPISSTKLYKLKYGARVQIVLQGTSIFTAENHP
IHLHGYDFYILAEGFGNFNPQTDTAKFNLVDPPLRNTASVPVNGWSVIRFVADNPGVWIM
HCHLDVHITWGLAMAFLVQNGVTQLEALEEPPVDLPVC

Transcript Sequence

Gene sequence data has not been registered.